STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY30811.1PFAM: Ribulose bisphosphate carboxylase, small chain; ATPase family associated with various cellular activities (AAA); COGs: COG4451 Ribulose bisphosphate carboxylase small subunit; InterPro IPR000894:IPR003959; KEGG: npu:Npun_F4201 ribulose bisphosphate carboxylase, small chain; PFAM: Ribulose bisphosphate carboxylase, small chain; ATPase, AAA-type, core; SMART: Ribulose bisphosphate carboxylase, small chain; SPTR: Ribulose bisphosphate carboxylase, small chain. (417 aa)    
Predicted Functional Partners:
cbbL
Ribulose 1,5-bisphosphate carboxylase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
  
 
 0.894
AFY30817.1
PFAM: Ribulose bisphosphate carboxylase, small chain; COGs: COG4451 Ribulose bisphosphate carboxylase small subunit; InterPro IPR000894; KEGG: npu:Npun_F4197 ribulose bisphosphate carboxylase, small chain RbcS; PFAM: Ribulose bisphosphate carboxylase, small chain; PRIAM: Ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain; SPTR: Ribulose bisphosphate carboxylase, small chain RbcS.
    
 
 0.850
AFY35113.1
KEGG: npu:Npun_F4437 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.810
AFY32896.1
KEGG: ava:Ava_3380 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
thf1
Protein thf1; May be involved in photosynthetic membrane biogenesis.
  
     0.745
AFY30818.1
PFAM: RbcX protein; InterPro IPR003435; KEGG: npu:Npun_F4196 chaperonin family protein RbcX; PFAM: Chaperonin-like RbcX; SPTR: Chaperonin-like protein.
 
   
 0.742
AFY33943.1
PFAM: Protein of unknown function (DUF1230); InterPro IPR009631; KEGG: npu:Npun_R4340 hypothetical protein; PFAM: Uncharacterised protein family Ycf36; SPTR: Putative uncharacterized protein.
  
     0.734
AFY32612.1
PFAM: Protein of unknown function (DUF3352); KEGG: npu:Npun_F5954 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.727
AFY34412.1
PFAM: Glutaredoxin-like domain (DUF836); InterPro IPR008554; KEGG: npu:Npun_R2487 glutaredoxin 2; PFAM: Glutaredoxin-like; SPTR: Glutaredoxin 2.
  
     0.723
AFY33675.1
Tocopherol cyclase; KEGG: npu:Npun_R0149 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.718
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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