STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY30912.1PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ana:alr1669 hypothetical protein; PFAM: Polysaccharide deacetylase; SPTR: Alr1669 protein. (223 aa)    
Predicted Functional Partners:
AFY30913.1
PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: npu:Npun_R3597 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family.
     
 0.759
AFY30915.1
DevC protein; PFAM: Predicted permease; TIGRFAM: DevC protein; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838:IPR005891; KEGG: npu:Npun_F4147 DevC protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: DevC protein; TIGRFAM: DevC protein.
   
   0.512
AFY30914.1
TIGRFAM: ABC exporter membrane fusion protein, DevB family; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR000089:IPR014315; KEGG: npu:Npun_F3598 carbamoyl-phosphate synthase L chain, ATP-binding; PFAM: Biotin/lipoyl attachment; SPTR: Carbamoyl-phosphate synthase L chain, ATP-binding; TIGRFAM: ABC transporter membrane fusion protein, DevB type.
       0.503
AFY31884.1
PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: npu:Npun_R4124 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2.
 
  
 0.457
AFY35379.1
PFAM: Glycosyl transferases group 1; Phytanoyl-CoA dioxygenase (PhyH); Glycosyl transferase family 2; COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775:IPR001296:IPR001173; KEGG: gvi:gll4303 hypothetical protein; PFAM: Glycosyl transferase, family 2; Phytanoyl-CoA dioxygenase; Glycosyl transferase, group 1; SPTR: Gll4303 protein.
 
  
 0.449
AFY30916.1
PFAM: ABC transporter; TIGRFAM: ABC exporter ATP-binding subunit, DevA family; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593:IPR014324; KEGG: npu:Npun_F3600 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; TIGRFAM: ABC transporter ATP-binding subunit, DevA type.
       0.412
AFY31119.1
PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: npu:Npun_R6005 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2.
 
  
 0.405
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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