STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY31475.1Male sterility domain protein; PFAM: NmrA-like family; Fatty acid hydroxylase superfamily; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR006694:IPR013120; KEGG: npu:Npun_F1048 bifunctional sterol desaturase/short chain dehydrogenase; PFAM: Male sterility, NAD-binding; Fatty acid hydroxylase; SPTR: Putative uncharacterized protein. (408 aa)    
Predicted Functional Partners:
AFY31884.1
PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: npu:Npun_R4124 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2.
   
 0.909
AFY34026.1
PFAM: Squalene/phytoene synthase; COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: ava:Ava_4794 phytoene synthase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthase; manually curated.
  
 
 0.844
AFY34554.1
Farnesyl-diphosphate farnesyltransferase; PFAM: Squalene/phytoene synthase; COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: npu:Npun_R2917 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase; SPTR: Squalene/phytoene synthase.
  
 
 0.844
AFY30807.1
Squalene-hopene cyclase; PFAM: Prenyltransferase and squalene oxidase repeat; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase; COGs: COG1657 Squalene cyclase; InterPro IPR001330:IPR006400:IPR018333; KEGG: npu:Npun_R6245 squalene/oxidosqualene cyclase; PFAM: Prenyltransferase/squalene oxidase; PRIAM: Squalene--hopene cyclase; SPTR: Squalene/oxidosqualene cyclase; TIGRFAM: Hopene cyclase; Squalene cyclase.
   
 
 0.728
AFY34996.1
KEGG: alv:Alvin_1794 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.728
AFY31554.1
KEGG: npu:Npun_R4638 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.710
AFY34907.1
Hypothetical protein; TIGRFAM: DNA phosphorothioation-associated putative methyltransferase; KEGG: npu:Npun_F4495 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.710
AFY36427.1
KEGG: npu:Npun_F5483 TPR repeat-containing protein; SPTR: TPR repeat-containing protein.
  
     0.682
AFY32893.1
PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: npu:Npun_R5097 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: O-antigen polymerase.
  
     0.678
AFY32274.1
PFAM: Protein of unknown function (DUF3769); InterPro IPR010664; KEGG: ava:Ava_3002 hypothetical protein; PFAM: Lipopolysccharide assembly, LptC-related; SPTR: Putative uncharacterized protein.
  
     0.651
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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