STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY31626.1Integrase family protein; PFAM: Domain of unknown function (DUF3596); Phage integrase family; InterPro IPR002104; KEGG: npu:Npun_R1655 phage integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Phage integrase family protein. (404 aa)    
Predicted Functional Partners:
AFY31624.1
Hypothetical protein.
       0.773
AFY31625.1
Hypothetical protein.
       0.773
AFY31628.1
Oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterPro IPR010046:IPR006656:IPR006657; KEGG: npu:Npun_R1654 oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; PRIAM: Nitrate reductase; SPTR: Oxidoreductase alpha (Molybdopterin) subunit; TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin [...]
       0.574
AFY31623.1
KEGG: ana:alr9504 hypothetical protein; SPTR: Orf3.
     
 0.549
AFY31622.1
Hypothetical protein.
       0.539
AFY31534.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: npu:Npun_F3689 CDP-alcohol phosphatidyltransferase; SPTR: CDP-alcohol phosphatidyltransferase.
  
     0.489
AFY31629.1
KEGG: ana:all2399 hypothetical protein; SPTR: All2399 protein.
       0.460
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.448
AFY33581.1
Tetratricopeptide TPR_1 repeat-containing protein; PFAM: NB-ARC domain; InterPro IPR001440:IPR019734; KEGG: npu:Npun_F2261 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat-containing protein.
  
     0.433
AFY36255.1
KEGG: cyn:Cyan7425_3257 anti-ECFsigma factor, ChrR; SPTR: Anti-ECFsigma factor, ChrR.
  
     0.421
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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