STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY31779.1Excinuclease ABC C subunit domain protein; PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: glo:Glov_3514 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: Excinuclease ABC C subunit domain protein. (136 aa)    
Predicted Functional Partners:
AFY31780.1
PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: cyh:Cyan8802_0727 restriction modification system DNA specificity domain protein; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Restriction modification system DNA specificity domain protein.
       0.790
AFY31781.1
Hypothetical protein; COGs: COG4637 ATPase; KEGG: srm:SRM_02266 hypothetical protein; SPTR: ATPase-like protein.
       0.773
AFY31782.1
KEGG: srm:SRM_02265 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFY32445.1
KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.
  
  
 0.648
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.518
AFY35684.1
TIGRFAM: pseudaminic acid biosynthesis-associated methylase; InterPro IPR020027; KEGG: nha:Nham_1200 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Pseudaminic acid biosynthesis-associated methyltransferase.
  
  
 0.507
AFY31778.1
KEGG: syn:sll2006 hypothetical protein; SPTR: Sll2006 protein.
       0.494
AFY31777.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyn:Cyan7425_3647 protein of unknown function DUF820; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
       0.410
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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