STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY32301.1PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: npu:Npun_R0286 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein. (252 aa)    
Predicted Functional Partners:
AFY30585.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: npu:Npun_F5219 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.734
AFY33573.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: npu:Npun_R6260 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.734
AFY30949.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: cyc:PCC7424_3403 protein of unknown function DUF820; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.729
AFY31501.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: gvi:gll0822 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.723
AFY32679.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: gvi:glr0695 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Glr0695 protein.
  
     0.674
AFY34642.1
PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: npu:Npun_F4828 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.636
rsgA
Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.623
AFY32303.1
PFAM: SirA-like protein; InterPro IPR001455; KEGG: ana:asr2448 hypothetical protein; PFAM: SirA-like; SPTR: Asr2448 protein; Belongs to the sulfur carrier protein TusA family.
       0.623
dnaJ
Chaperone protein dnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
       0.623
AFY32094.1
PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: cyn:Cyan7425_2499 protein of unknown function DUF820; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.
  
     0.574
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.