STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY32442.1PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: npu:Npun_F4766 pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat protein. (253 aa)    
Predicted Functional Partners:
AFY32441.1
PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: npu:Npun_F4767 pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat protein.
 
    
0.551
AFY32443.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR017584:IPR013027; KEGG: npu:Npun_R4765 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Ankyrin; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal.
       0.418
AFY32444.1
KEGG: cyp:PCC8801_3773 type II site-specific deoxyribonuclease; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type-2 restriction enzyme NspV.
       0.416
AFY32445.1
KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.
       0.416
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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