AFY32445.1 protein (Calothrix sp. PCC7507) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AFY32445.1

KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV. (488 aa)

Predicted Functional Partners:

AFY32444.1

0.798

AFY32443.1

0.768

AFY31779.1

0.648

rsmI

0.641

AFY31418.1

0.595

AFY33165.1

0.501

AFY32446.1

0.485

AFY36433.1

0.445

AFY35479.1

0.436

AFY34332.1

0.432

Your Current Organism:

Calothrix sp. PCC7507

NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFY31418.1	AFY32445.1	Cal7507_0939	Cal7507_2001	PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_4319 protein of unknown function DUF820; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	0.595
AFY31418.1	AFY35479.1	Cal7507_0939	Cal7507_5137	PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_4319 protein of unknown function DUF820; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.	PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); COGs: COG5464 conserved hypothetical protein; InterPro IPR010106; KEGG: ana:all2183 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP01784.	0.570
AFY31418.1	AFY36433.1	Cal7507_0939	Cal7507_6136	PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_4319 protein of unknown function DUF820; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.	Transposase IS891/IS1136/IS1341 family; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: mar:MAE_33580 transposase; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal; SPTR: Similar to tr\|Q2JQ93\|Q2JQ93_SYNJB ISSoc2; manually curated.	0.420
AFY31779.1	AFY32445.1	Cal7507_1309	Cal7507_2001	Excinuclease ABC C subunit domain protein; PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: glo:Glov_3514 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: Excinuclease ABC C subunit domain protein.	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	0.648
AFY31779.1	rsmI	Cal7507_1309	Cal7507_3179	Excinuclease ABC C subunit domain protein; PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: glo:Glov_3514 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: Excinuclease ABC C subunit domain protein.	Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.518
AFY32443.1	AFY32444.1	Cal7507_1999	Cal7507_2000	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR017584:IPR013027; KEGG: npu:Npun_R4765 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Ankyrin; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal.	KEGG: cyp:PCC8801_3773 type II site-specific deoxyribonuclease; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type-2 restriction enzyme NspV.	0.768
AFY32443.1	AFY32445.1	Cal7507_1999	Cal7507_2001	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR017584:IPR013027; KEGG: npu:Npun_R4765 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Ankyrin; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal.	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	0.768
AFY32443.1	AFY32446.1	Cal7507_1999	Cal7507_2002	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR017584:IPR013027; KEGG: npu:Npun_R4765 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Ankyrin; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: ava:Ava_0465 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Amino acid/amide ABC transporter substrate-binding protein, HAAT family.	0.410
AFY32444.1	AFY32443.1	Cal7507_2000	Cal7507_1999	KEGG: cyp:PCC8801_3773 type II site-specific deoxyribonuclease; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type-2 restriction enzyme NspV.	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR017584:IPR013027; KEGG: npu:Npun_R4765 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Ankyrin; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal.	0.768
AFY32444.1	AFY32445.1	Cal7507_2000	Cal7507_2001	KEGG: cyp:PCC8801_3773 type II site-specific deoxyribonuclease; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type-2 restriction enzyme NspV.	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	0.798
AFY32444.1	AFY32446.1	Cal7507_2000	Cal7507_2002	KEGG: cyp:PCC8801_3773 type II site-specific deoxyribonuclease; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type-2 restriction enzyme NspV.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: ava:Ava_0465 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Amino acid/amide ABC transporter substrate-binding protein, HAAT family.	0.412
AFY32445.1	AFY31418.1	Cal7507_2001	Cal7507_0939	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	PFAM: Protein of unknown function (DUF820); COGs: COG4636 conserved hypothetical protein; InterPro IPR008538; KEGG: cyc:PCC7424_4319 protein of unknown function DUF820; PFAM: Domain of unknown function DUF820; SPTR: Putative uncharacterized protein.	0.595
AFY32445.1	AFY31779.1	Cal7507_2001	Cal7507_1309	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	Excinuclease ABC C subunit domain protein; PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: glo:Glov_3514 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: Excinuclease ABC C subunit domain protein.	0.648
AFY32445.1	AFY32443.1	Cal7507_2001	Cal7507_1999	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR017584:IPR013027; KEGG: npu:Npun_R4765 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Ankyrin; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal.	0.768
AFY32445.1	AFY32444.1	Cal7507_2001	Cal7507_2000	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	KEGG: cyp:PCC8801_3773 type II site-specific deoxyribonuclease; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type-2 restriction enzyme NspV.	0.798
AFY32445.1	AFY32446.1	Cal7507_2001	Cal7507_2002	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: ava:Ava_0465 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Amino acid/amide ABC transporter substrate-binding protein, HAAT family.	0.485
AFY32445.1	AFY33165.1	Cal7507_2001	Cal7507_2748	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	PFAM: Protein of unknown function (DUF820); InterPro IPR008538; KEGG: ana:all5267 hypothetical protein; PFAM: Domain of unknown function DUF820; SPTR: All5267 protein.	0.501
AFY32445.1	AFY34332.1	Cal7507_2001	Cal7507_3944	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	PilT protein domain protein; PFAM: PIN domain; InterPro IPR002716; KEGG: amr:AM1_2234 hypothetical protein; PFAM: PilT protein, N-terminal; SPTR: PilT protein domain protein.	0.432
AFY32445.1	AFY35479.1	Cal7507_2001	Cal7507_5137	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); COGs: COG5464 conserved hypothetical protein; InterPro IPR010106; KEGG: ana:all2183 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP01784.	0.436
AFY32445.1	AFY36433.1	Cal7507_2001	Cal7507_6136	KEGG: mar:MAE_60330 type II restriction enzyme NspV-like protein; SPTR: Modification methylase NspV.	Transposase IS891/IS1136/IS1341 family; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: mar:MAE_33580 transposase; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal; SPTR: Similar to tr\|Q2JQ93\|Q2JQ93_SYNJB ISSoc2; manually curated.	0.445