STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY32461.1Protein of unknown function DUF92 transmembrane; PFAM: Integral membrane protein DUF92; TIGRFAM: TIGR00297 family protein; COGs: COG1836 membrane protein; InterPro IPR002794; KEGG: ava:Ava_4223 hypothetical protein; PFAM: Protein of unknown function DUF92, TMEM19; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF92, TMEM19. (262 aa)    
Predicted Functional Partners:
AFY32609.1
Protein of unknown function YGGT; PFAM: YGGT family; InterPro IPR003425; KEGG: npu:Npun_F5950 protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; SPTR: Putative uncharacterized protein.
  
     0.734
AFY32146.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: npu:Npun_F4810 photosystem II manganese-stabilizing protein PsbO; PFAM: Photosystem II PsbO, manganese-stabilising; SPTR: Photosystem II manganese-stabilizing protein PsbO.
  
     0.732
AFY34025.1
Phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG3349 conserved hypothetical protein; InterPro IPR002937:IPR014102; KEGG: naz:Aazo_2875 phytoene desaturase; PFAM: Amine oxidase; PRIAM: Carotene 7,8-desaturase; SPTR: Phytoene desaturase; TIGRFAM: Phytoene desaturase.
  
     0.713
AFY32130.1
PFAM: Protein of unknown function (DUF3593); KEGG: ava:Ava_3373 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.705
AFY34667.1
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
     0.699
AFY32129.1
PFAM: Protein of unknown function (DUF2499); InterPro IPR019634; KEGG: naz:Aazo_2746 hypothetical protein; PFAM: Uncharacterised protein family Ycf49; SPTR: Putative uncharacterized protein.
  
     0.698
AFY36193.1
PFAM: Protein of unknown function (DUF1350); InterPro IPR010765; KEGG: ana:alr1085 hypothetical protein; PFAM: Protein of unknown function DUF1350; SPTR: Alr1085 protein.
  
     0.689
AFY31074.1
PFAM: Domain of unknown function (DUF1995); InterPro IPR018962; KEGG: npu:Npun_R2561 hypothetical protein; PFAM: Domain of unknown function DUF1995; SPTR: Putative uncharacterized protein.
  
     0.686
AFY32156.1
Ycf48-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.676
AFY33749.1
KEGG: naz:Aazo_0686 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.671
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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