STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY32527.1Endo-1,4-beta-xylanase; PFAM: Glycosyl hydrolase family 10; COGs: COG3693 Beta-1 4-xylanase; InterPro IPR001000; KEGG: cyn:Cyan7425_1132 endo-1,4-beta-xylanase; PFAM: Glycoside hydrolase, family 10; PRIAM: Endo-1,4-beta-xylanase; SMART: Glycoside hydrolase, family 10; SPTR: Endo-1,4-beta-xylanase. (388 aa)    
Predicted Functional Partners:
AFY33503.1
Glycoside hydrolase family 5; PFAM: Cellulose binding domain; Cellulase (glycosyl hydrolase family 5); COGs: COG2730 Endoglucanase; InterPro IPR001919:IPR001547; KEGG: cwo:Cwoe_0159 cellulase; PFAM: Glycoside hydrolase, family 5; Cellulose-binding domain, family II, bacterial type; SMART: Cellulose-binding domain, family II, bacterial type; SPTR: Cellulase (Glycosyl hydrolase family 5), putative.
   
 0.788
AFY32528.1
PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KEGG: npu:Npun_R1487 WecB/TagA/CpsF family glycosyl transferase; PFAM: Glycosyl transferase WecB/TagA/CpsF; SPTR: Glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
       0.780
AFY31648.1
Esterase; PFAM: Putative esterase; COGs: COG2382 Enterochelin esterase; InterPro IPR000801; KEGG: npu:Npun_F4608 putative esterase; PFAM: Putative esterase; SPTR: Putative esterase.
 
 
 0.730
AFY32698.1
Carbohydrate-binding protein; PFAM: BNR/Asp-box repeat; KEGG: amd:AMED_8497 carbohydrate-binding protein; SPTR: Probably secreted sialidase; several ASP-boxes and dockerin domain.
 
   
 0.706
AFY33445.1
PFAM: Protein of unknown function, DUF255; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR004879; KEGG: npu:Npun_R6218 hypothetical protein; SPTR: Putative uncharacterized protein.
    
 
 0.685
AFY32526.1
PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475:IPR003362; KEGG: ava:Ava_1374 sugar transferase; PFAM: Bacterial sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Sugar transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
       0.663
AFY32525.1
LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: ava:Ava_3570 LmbE-like protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: LmbE-like protein.
       0.655
AFY30989.1
Glycosyl hydrolase BNR repeat-containing protein; PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: pjd:Pjdr2_2544 S-layer domain protein; PFAM: BNR repeat; SPTR: S-layer domain protein.
 
   
 0.625
AFY32531.1
PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: npu:Npun_R1492 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: O-antigen polymerase.
 
     0.589
AFY32529.1
Hypothetical protein; COGs: COG0438 Glycosyltransferase; KEGG: npu:Npun_R1488 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.547
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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