STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panDL-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (127 aa)    
Predicted Functional Partners:
panC/cmk
Cytidylate kinase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.
 
 0.998
panB
Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
 
  
 0.985
AFY31581.1
PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type; COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; InterPro IPR005814; KEGG: npu:Npun_F1941 4-aminobutyrate aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.921
AFY35186.1
PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: npu:Npun_F0840 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; SPTR: Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.906
AFY35608.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
    
 0.850
AFY32538.1
Fumarate hydratase class II; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: aspartate ammonia-lyase; COGs: COG1027 Aspartate ammonia-lyase; HAMAP: Fumarate hydratase, class II; InterPro IPR005677:IPR022761:IPR018951; KEGG: npu:Npun_F2551 aspartate ammonia-lyase; PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal; PRIAM: Aspartate ammonia-lyase; SPTR: Fumarate lyase.
     
 0.833
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.814
AFY35743.1
Aspartate transaminase; PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: npu:Npun_R0187 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Aspartate transaminase; SPTR: Aminotransferase, class I and II.
    
 0.812
AFY31167.1
Aspartoacylase; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; COGs: COG2988 Succinylglutamate desuccinylase; HAMAP: Aspartoacylase; InterPro IPR007036:IPR016708; KEGG: npu:Npun_R2728 aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; PRIAM: Aspartoacylase; SPTR: Probable aspartoacylase 1; Belongs to the AspA/AstE family. Aspartoacylase subfamily.
     
  0.800
AFY33942.1
PFAM: L-asparaginase II; COGs: COG4448 L-asparaginase II; InterPro IPR010349; KEGG: ava:Ava_0733 L-asparaginase II; PFAM: L-asparaginase II; SPTR: Alr4171 protein.
     
  0.800
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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