STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY32597.1PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: npu:Npun_F6135 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen. (184 aa)    
Predicted Functional Partners:
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
    0.606
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
  
    0.605
cbbL
Ribulose 1,5-bisphosphate carboxylase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
  
   
 0.431
AFY30817.1
PFAM: Ribulose bisphosphate carboxylase, small chain; COGs: COG4451 Ribulose bisphosphate carboxylase small subunit; InterPro IPR000894; KEGG: npu:Npun_F4197 ribulose bisphosphate carboxylase, small chain RbcS; PFAM: Ribulose bisphosphate carboxylase, small chain; PRIAM: Ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain; SPTR: Ribulose bisphosphate carboxylase, small chain RbcS.
  
     0.401
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.