Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY32668.1 | AFY32669.1 | Cal7507_2231 | Cal7507_2232 | Prolyl aminopeptidase; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR005944; KEGG: ava:Ava_2994 prolyl aminopeptidase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Proline iminopeptidase; TIGRFAM: Peptidase S33, proline iminopeptidase 1; Belongs to the peptidase S33 family. | Hypothetical protein. | 0.559 |
AFY32669.1 | AFY32668.1 | Cal7507_2232 | Cal7507_2231 | Hypothetical protein. | Prolyl aminopeptidase; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073:IPR005944; KEGG: ava:Ava_2994 prolyl aminopeptidase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Proline iminopeptidase; TIGRFAM: Peptidase S33, proline iminopeptidase 1; Belongs to the peptidase S33 family. | 0.559 |
AFY32669.1 | AFY32670.1 | Cal7507_2232 | Cal7507_2233 | Hypothetical protein. | PFAM: Protein of unknown function (DUF721); COGs: COG5512 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives; InterPro IPR007922; KEGG: npu:Npun_F3966 hypothetical protein; PFAM: Protein of unknown function DUF721/UPF0232; SPTR: Putative uncharacterized protein. | 0.437 |
AFY32670.1 | AFY32669.1 | Cal7507_2233 | Cal7507_2232 | PFAM: Protein of unknown function (DUF721); COGs: COG5512 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives; InterPro IPR007922; KEGG: npu:Npun_F3966 hypothetical protein; PFAM: Protein of unknown function DUF721/UPF0232; SPTR: Putative uncharacterized protein. | Hypothetical protein. | 0.437 |