STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY32684.1PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341:IPR013342; KEGG: npu:Npun_R6604 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; Mandelate racemase/muconate lactonizing enzyme, N-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein. (350 aa)    
Predicted Functional Partners:
AFY32685.1
PFAM: Protein of unknown function (DUF1611); COGs: COG3367 conserved hypothetical protein; InterPro IPR011669; KEGG: npu:Npun_R6603 hypothetical protein; PFAM: Protein of unknown function DUF1611; SPTR: Putative uncharacterized protein.
     0.976
AFY32683.1
PFAM: NUDIX domain; InterPro IPR000086; KEGG: ava:Ava_3513 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase.
       0.539
AFY32042.1
Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
    0.417
AFY31899.1
PFAM: Major Facilitator Superfamily; KEGG: npu:Npun_F4683 major facilitator transporter; SPTR: Major facilitator superfamily MFS_1.
  
   
 0.401
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.