STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY32950.1TIGRFAM: PEP-CTERM protein sorting domain; PEP-CTERM protein sorting domain, cyanobacterial subclass; InterPro IPR013424; KEGG: ava:Ava_1389 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: PEP-CTERM anchor. (215 aa)    
Predicted Functional Partners:
AFY32951.1
Type 1 secretion target domain protein; PFAM: Endonuclease/Exonuclease/phosphatase family; Protein of unknown function (DUF3616); TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass); COGs: COG2374 extracellular nuclease; InterPro IPR019960:IPR005135:IPR001343; KEGG: npu:Npun_F1424 putative outer membrane adhesin like proteiin; PFAM: Endonuclease/exonuclease/phosphatase; Haemolysin-type calcium-binding repeat; SPTR: Endonuclease/exonuclease/phosphatase; TIGRFAM: Type 1 secretion, target domain, C-terminal.
       0.506
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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