STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY33466.1S-layer domain-containing protein; PFAM: S-layer homology domain; KWG Leptospira; InterPro IPR001119:IPR011647; KEGG: cki:Calkr_1515 kwg repeat protein; PFAM: S-layer homology domain; KWG Leptospira; SPTR: Putative uncharacterized protein. (570 aa)    
Predicted Functional Partners:
AFY32128.1
PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB; COGs: COG2327 conserved hypothetical protein; InterPro IPR007345:IPR019896; KEGG: npu:Npun_F0054 polysaccharide pyruvyl transferase; PFAM: Polysaccharide pyruvyl transferase; SPTR: Polysaccharide pyruvyl transferase; TIGRFAM: Polysaccharide pyruvyl transferase, CsaB.
  
     0.657
cofG
FO synthase subunit 1; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil.
       0.526
AFY33465.1
PFAM: Bacterial regulatory proteins, luxR family; InterPro IPR000792; KEGG: ava:Ava_3471 LuxR family transcriptional regulator; SMART: Transcription regulator LuxR, C-terminal; SPTR: Transcriptional regulator, LuxR family.
       0.439
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.