STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY33473.1Rieske (2Fe-2S) iron-sulfur domain protein; PFAM: Rieske [2Fe-2S] domain; COGs: COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenase large terminal subunit; InterPro IPR017941; KEGG: npu:Npun_F0587 Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) domain protein. (351 aa)    
Predicted Functional Partners:
AFY33472.1
Protein of unknown function UPF0047; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: npu:Npun_F0586 hypothetical protein; PFAM: Uncharacterised protein family UPF0047; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0047.
       0.570
AFY33471.1
Aspartate transaminase; PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: ava:Ava_3695 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Aspartate transaminase; SPTR: L-aspartate aminotransferase apoenzyme.
     
 0.527
AFY32945.1
TIGRFAM: conserved hypothetical protein; InterPro IPR012668; KEGG: pla:Plav_1509 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02466.
  
     0.452
AFY32694.1
PFAM: O-Antigen ligase; COGs: COG3307 Lipid A core - O-antigen ligase; InterPro IPR007016; KEGG: mar:MAE_41560 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: O-antigen polymerase.
  
     0.435
AFY31162.1
Flavanone 3-dioxygenase; PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3491 Isopenicillin N synthase and related dioxygenase; InterPro IPR005123; KEGG: ava:Ava_5009 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; PRIAM: Flavanone 3-dioxygenase; SPTR: 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.403
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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