STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY33613.1PFAM: Phage late control gene D protein (GPD); COGs: COG3500 Phage protein D; KEGG: npu:Npun_F1409 hypothetical protein; SPTR: Putative uncharacterized protein. (354 aa)    
Predicted Functional Partners:
AFY33615.1
GPW/gp25 family protein; PFAM: Gene 25-like lysozyme; COGs: COG3628 Phage baseplate assembly protein W; InterPro IPR007048; KEGG: npu:Npun_F1411 gpW/GP25 family protein; PFAM: GPW/gp25; SPTR: GPW/gp25 family protein.
 
 
 0.997
AFY33614.1
Rhs element Vgr protein; PFAM: Phage-related baseplate assembly protein; COGs: COG3501 conserved hypothetical protein; KEGG: npu:Npun_F1410 rhs element Vgr protein; SPTR: Rhs element Vgr protein.
   
 0.994
AFY33612.1
Peptidoglycan-binding lysin domain protein; PFAM: LysM domain; InterPro IPR018392:IPR002482; KEGG: npu:Npun_F1408 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Peptidoglycan-binding LysM.
 
   0.992
AFY33607.1
PFAM: Phage tail sheath protein; COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: npu:Npun_F1403 phage tail sheath protein fi-like protein; SPTR: Phage tail sheath protein fi-like protein.
 
 
 0.991
AFY33606.1
PFAM: Phage tail sheath protein; COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: npu:Npun_F1402 phage tail sheath protein; SPTR: Phage tail sheath protein.
 
 
 0.990
AFY32738.1
GPW/gp25 family protein; PFAM: Gene 25-like lysozyme; COGs: COG3628 Phage baseplate assembly protein W; InterPro IPR007048; KEGG: amr:AM1_6406 gpW / GP25 family protein; PFAM: GPW/gp25; SPTR: GPW / gp25 family.
 
 
 0.988
AFY33616.1
PFAM: Baseplate J-like protein; TIGRFAM: conserved hypothetical protein, phage tail-like region; KEGG: npu:Npun_F1412 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.985
AFY33610.1
PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein; InterPro IPR011747; KEGG: npu:Npun_F1406 phage tail protein; SPTR: Conserved hypothetical phage tail protein; TIGRFAM: Conserved hypothetical protein CHP02241, phage tail region protein.
 
 
   0.984
AFY34112.1
PFAM: Phage tail sheath protein; COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: bra:BRADO4390 putative phage tail sheath protein; SPTR: Putative phage tail sheath protein.
 
 
 0.983
AFY33618.1
PFAM: Phage tail protein (Tail_P2_I); TIGRFAM: phage tail protein domain; phage tail protein, P2 protein I family; InterPro IPR011748; KEGG: npu:Npun_F1414 phage tail protein; SPTR: Phage tail protein; TIGRFAM: Phage tail protein.
 
  
 0.982
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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