STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY33771.1KEGG: ava:Ava_1728 hypothetical protein; SPTR: Putative uncharacterized protein. (80 aa)    
Predicted Functional Partners:
AFY33772.1
PilT protein domain protein; PFAM: PIN domain; COGs: COG4374 conserved hypothetical protein; InterPro IPR002716; KEGG: ava:Ava_1729 PilT protein-like; PFAM: PilT protein, N-terminal; SPTR: PilT protein-like protein.
       0.779
AFY33770.1
Methyltransferase type 11; PFAM: ubiE/COQ5 methyltransferase family; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: cyh:Cyan8802_3809 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11.
       0.547
AFY33773.1
Hypothetical protein; PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR008915:IPR004387:IPR001478; KEGG: ana:all3971 hypothetical protein; PFAM: Peptidase M50; SMART: PDZ/DHR/GLGF; SPTR: Putative zinc metalloprotease all3971; TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase.
       0.503
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
       0.503
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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