STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY34484.1PFAM: O-Antigen ligase; KEGG: rpe:RPE_3501 O-antigen polymerase; SPTR: O-antigen polymerase. (432 aa)    
Predicted Functional Partners:
AFY33503.1
Glycoside hydrolase family 5; PFAM: Cellulose binding domain; Cellulase (glycosyl hydrolase family 5); COGs: COG2730 Endoglucanase; InterPro IPR001919:IPR001547; KEGG: cwo:Cwoe_0159 cellulase; PFAM: Glycoside hydrolase, family 5; Cellulose-binding domain, family II, bacterial type; SMART: Cellulose-binding domain, family II, bacterial type; SPTR: Cellulase (Glycosyl hydrolase family 5), putative.
  
 
 0.435
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.