STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY34605.1KEGG: naz:Aazo_3796 hypothetical protein; SPTR: Putative uncharacterized protein. (112 aa)    
Predicted Functional Partners:
AFY34606.1
PFAM: NB-ARC domain; KEGG: npu:Npun_F6508 NB-ARC; SPTR: NB-ARC.
       0.746
AFY34604.1
TIGRFAM: DNA binding domain, excisionase family; InterPro IPR010093; KEGG: cyj:Cyan7822_2012 DNA-binding domain-containing protein, excisionase family; SPTR: DNA binding domain protein, excisionase family; TIGRFAM: Excisionase/Xis, DNA-binding.
       0.516
AFY34603.1
DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; COGs: COG0863 DNA modification methylase; InterPro IPR002941; KEGG: cyj:Cyan7822_2011 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6; SPTR: DNA methylase N-4/N-6 domain protein.
       0.422
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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