STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY34668.1Cyclase/dehydrase; PFAM: Polyketide cyclase / dehydrase and lipid transport; COGs: COG5637 integral membrane protein; InterPro IPR005031; KEGG: npu:Npun_R0497 cyclase/dehydrase; PFAM: Streptomyces cyclase/dehydrase; SPTR: Cyclase/dehydrase. (151 aa)    
Predicted Functional Partners:
AFY34667.1
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
 
     0.820
AFY32295.1
PFAM: Protein of unknown function (DUF3067); KEGG: npu:Npun_F0133 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.747
AFY32146.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide; InterPro IPR002628; KEGG: npu:Npun_F4810 photosystem II manganese-stabilizing protein PsbO; PFAM: Photosystem II PsbO, manganese-stabilising; SPTR: Photosystem II manganese-stabilizing protein PsbO.
  
     0.718
AFY33749.1
KEGG: naz:Aazo_0686 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.717
AFY32923.1
KEGG: ana:all2545 hypothetical protein; SPTR: All2545 protein.
  
     0.705
AFY33546.1
PFAM: Protein of unknown function (DUF1092); InterPro IPR009472; KEGG: npu:Npun_R1620 hypothetical protein; PFAM: Protein of unknown function DUF1092; SPTR: Putative uncharacterized protein.
  
    0.703
AFY31456.1
KEGG: ana:alr2749 hypothetical protein; SPTR: Alr2749 protein.
  
     0.702
AFY30964.1
PFAM: Protein of unknown function (DUF2930); KEGG: ana:all3821 hypothetical protein; SPTR: All3821 protein.
  
     0.691
AFY36008.1
PFAM: Protein of unknown function (DUF3119); KEGG: npu:Npun_R4268 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.691
AFY32380.1
PFAM: NnrU protein; COGs: COG4094 membrane protein; InterPro IPR009915; KEGG: ava:Ava_1748 NnrU; SPTR: NnrU.
  
     0.687
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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