STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY34914.1Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; TIGRFAM: PPOX class probable FMN-dependent enzyme, alr4036 family; COGs: COG5135 conserved hypothetical protein; InterPro IPR011576; KEGG: npu:Npun_F5749 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding. (194 aa)    
Predicted Functional Partners:
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
     
 0.920
pdxJ
Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
     
  0.900
AFY33624.1
NADP-dependent oxidoreductase domain protein; PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: ava:Ava_3061 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; SPTR: Alr0300 protein.
   
 
  0.900
AFY35238.1
Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: TIGR04168 family protein; InterPro IPR004843; KEGG: npu:Npun_F6453 metallophosphoesterase; PFAM: Metallo-dependent phosphatase; SPTR: Metallophosphoesterase.
  
     0.636
AFY34913.1
PFAM: Mannose-6-phosphate isomerase; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR001538; KEGG: npu:Npun_R4501 mannose-6-phosphate isomerase, type II; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; SPTR: Mannose-6-phosphate isomerase, type II.
       0.578
AFY36414.1
GUN4 domain protein; PFAM: GUN4-like; InterPro IPR008629; KEGG: ana:all1826 hypothetical protein; PFAM: GUN4-like; SPTR: All1826 protein.
  
     0.568
AFY35519.1
COGs: COG4240 kinase; KEGG: npu:Npun_R5210 hypothetical protein; PRIAM: Glycerate kinase; SPTR: Putative uncharacterized protein.
  
     0.558
AFY31567.1
KEGG: npu:Npun_F0560 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.531
AFY34915.1
KEGG: npu:Npun_R5748 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.506
AFY34916.1
Tetratricopeptide TPR_2 repeat-containing protein; PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR013105:IPR019734; KEGG: npu:Npun_R5747 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_2 repeat protein.
       0.506
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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