STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY35305.1PFAM: NifU-like domain; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: ava:Ava_3034 nitrogen-fixing NifU-like; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; SPTR: Asr1309 protein. (76 aa)    
Predicted Functional Partners:
AFY30592.1
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
 
 
0.584
AFY35306.1
PFAM: Glycosyl hydrolase family 57; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300; KEGG: ana:alr1310 hypothetical protein; PFAM: Glycoside hydrolase, family 57, N-terminal; SPTR: Alr1310 protein.
       0.551
AFY35768.1
Pyruvate ferredoxin/flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
     
 0.537
ilvD
PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; HAMAP: Dihydroxy-acid dehydratase; InterPro IPR000581:IPR004404; KEGG: npu:Npun_R3783 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 
 0.522
AFY30591.1
Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
 
 
 0.517
AFY30918.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
   
  
 0.449
AFY32349.1
NIL domain-containing protein; PFAM: NIL domain; InterPro IPR018449:IPR001450; KEGG: npu:Npun_F4770 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: NIL domain; 4Fe-4S binding domain; SMART: NIL domain; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
   
  
 0.449
ndhI
NAD(P)H-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient; Belongs to the complex I 23 kDa subunit family.
   
  
 0.449
AFY30626.1
PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR000361:IPR016092; KEGG: naz:Aazo_1343 iron-sulfur cluster assembly accessory protein; PFAM: FeS cluster biogenesis; SPTR: HesB protein; TIGRFAM: FeS cluster insertion; Belongs to the HesB/IscA family.
  
 
 0.448
AFY33342.1
PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR000361:IPR016092; KEGG: npu:Npun_F3880 HesB/YadR/YfhF-family protein; PFAM: FeS cluster biogenesis; SPTR: HesB/YadR/YfhF-family protein; TIGRFAM: FeS cluster insertion; Belongs to the HesB/IscA family.
  
 
 0.448
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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