STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY35318.1KEGG: npu:Npun_F4429 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (64 aa)    
Predicted Functional Partners:
AFY35317.1
Rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin; COGs: COG1773 Rubredoxin; InterPro IPR004039; KEGG: tna:CTN_1927 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin.
       0.466
AFY35319.1
Cyclase/dehydrase; PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR005031; KEGG: naz:Aazo_2313 cyclase/dehydrase; PFAM: Streptomyces cyclase/dehydrase; SPTR: Cyclase/dehydrase.
       0.406
AFY35320.1
PFAM: Bacterial protein of unknown function (DUF924); COGs: COG3803 conserved hypothetical protein; InterPro IPR010323; KEGG: cyc:PCC7424_5377 protein of unknown function DUF924; PFAM: Protein of unknown function DUF924; SPTR: Putative uncharacterized protein.
       0.406
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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