STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY35510.1KEGG: cyc:PCC7424_1643 hypothetical protein; SPTR: Putative uncharacterized protein. (197 aa)    
Predicted Functional Partners:
AFY35511.1
Peptidase S1 and S6, chymotrypsin/Hap; PFAM: Trypsin; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; KEGG: mar:MAE_15590 peptidase S1 and S6, chymotrypsin/Hap; SPTR: Trypsin domain protein.
   
   0.711
AFY35512.1
PDZ/DHR/GLGF domain protein; PFAM: Trypsin; Tetratricopeptide repeat; PDZ domain (Also known as DHR or GLGF); COGs: COG0793 Periplasmic protease; InterPro IPR013105:IPR001440:IPR001478:IPR019734; KEGG: cyj:Cyan7822_3021 tetratricopeptide repeat-containing protein; PFAM: PDZ/DHR/GLGF; Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: PDZ/DHR/GLGF; Tetratricopeptide repeat; SPTR: Putative uncharacterized protein.
  
   0.705
ndhH
NADH dehydrogenase subunit D; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
    
 
 0.637
AFY31249.1
PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein; InterPro IPR010220; KEGG: ava:Ava_4475 CO2 hydration; PFAM: CO2 hydration; SPTR: CO2 hydration; TIGRFAM: CO2 hydration.
    
   0.556
AFY31533.1
PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein; InterPro IPR010220; KEGG: ava:Ava_0747 CO2 hydration; PFAM: CO2 hydration; SPTR: CO2 hydration; TIGRFAM: CO2 hydration.
    
   0.556
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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