STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY35638.1PFAM: Protein of unknown function (DUF1698); KEGG: mpo:Mpop_3263 hypothetical protein; SPTR: Methyltransferase. (289 aa)    
Predicted Functional Partners:
AFY35637.1
PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023:IPR006549:IPR005834; KEGG: amr:AM1_2196 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, putative; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: 3-deoxy-manno-octulosonate-8-phosphatase; SPTR: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, putative; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; HAD-superfamily hyd [...]
       0.778
AFY35634.1
KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR004800:IPR001347:IPR000644; KEGG: cyn:Cyan7425_4201 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; PRIAM: Arabinose-5-phosphate isomerase; SMART: Cystathionine beta-synthase, core; SPTR: KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ; Belongs to the SIS family. GutQ/KpsF subfamily.
       0.774
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.
       0.773
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; HAMAP: 3-deoxy-8-phosphooctulonate synthase; InterPro IPR006269:IPR006218; KEGG: cyn:Cyan7425_4199 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-8-phosphooctulonate synthase; SPTR: 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase.
       0.773
AFY35633.1
PFAM: Bacterial transferase hexapeptide (three repeats); COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: smd:Smed_1810 hypothetical protein; PFAM: Bacterial transferase hexapeptide repeat; SPTR: Putative uncharacterized protein.
       0.746
AFY35639.1
PFAM: Glycosyl transferase family 8; KEGG: cyn:Cyan7425_4197 glycosyl transferase family 8; SPTR: Glycosyl transferase family 8.
       0.668
AFY35632.1
Hypothetical protein; PFAM: Macrocin-O-methyltransferase (TylF); KEGG: cyn:Cyan7425_4202 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.569
AFY31960.1
PFAM: Domain of unknown function DUF29; InterPro IPR002636; KEGG: cyt:cce_0881 hypothetical protein; PFAM: Protein of unknown function DUF29; SPTR: Putative uncharacterized protein.
   
   0.525
AFY33393.1
PFAM: Chromatin associated protein KTI12; COGs: COG4639 kinase; KEGG: npu:Npun_R6086 hypothetical protein; SPTR: Putative uncharacterized protein.
   
   0.525
AFY35630.1
PFAM: ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525; KEGG: cyn:Cyan7425_4204 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter.
       0.493
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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