STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY35964.1Protein of unknown function DUF1486; InterPro IPR009959; KEGG: rha:RHA1_ro08383 hypothetical protein; PFAM: Protein of unknown function DUF1486; SPTR: Putative uncharacterized protein. (137 aa)    
Predicted Functional Partners:
AFY35963.1
PFAM: Cupin domain; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: rxy:Rxyl_3189 cupin 2, barrel; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2, conserved barrel.
       0.693
AFY35965.1
Hypothetical protein.
       0.498
AFY35966.1
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: npu:Npun_R1990 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold protein.
       0.498
AFY35962.1
PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro IPR004106; KEGG: sal:Sala_1978 prolyl oligopeptidase; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; SPTR: Prolyl oligopeptidase.
       0.453
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.