STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY36056.1PFAM: Domain of unknown function (DUF1802); COGs: COG4293 conserved hypothetical protein; InterPro IPR014923; KEGG: npu:Npun_R2662 hypothetical protein; PFAM: Protein of unknown function DUF1802; SPTR: Putative uncharacterized protein. (197 aa)    
Predicted Functional Partners:
hisS
PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR015807:IPR002314:IPR004154; KEGG: npu:Npun_R5420 histidyl-tRNA synthetase; PFAM: Anticodon-binding; Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup.
       0.773
AFY34736.1
KEGG: npu:Npun_R2777 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.565
AFY35436.1
KEGG: npu:Npun_R4187 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.452
AFY34266.1
PFAM: Cupin domain; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: ana:all3747 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: All3747 protein.
  
     0.447
cofH
FO synthase subunit 2; Catalyzes the radical-mediated synthesis of 5-amino-5-(4- hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil from 5-amino-6-(D- ribitylamino)uracil and L-tyrosine.
  
     0.436
AFY34070.1
PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR007867; KEGG: syf:Synpcc7942_1572 dehydrogenase subunit-like protein; PFAM: Glucose-methanol-choline oxidoreductase, C-terminal; FAD dependent oxidoreductase; SPTR: Dehydrogenase subunit-like protein.
  
     0.422
AFY33848.1
KEGG: npu:Npun_R4187 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.419
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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