STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY36148.1KEGG: ava:Ava_4934 transmembrane transcriptional regulator (anti-sigma factor); SPTR: Predicted transmembrane transcriptional regulator (Anti-sigmafactor). (204 aa)    
Predicted Functional Partners:
AFY36147.1
RNA polymerase, sigma subunit, ECF family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: ana:alr3280 RNA polymerase sigma factor RpoE; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-E factor; TIGRFAM: RNA polymerase sigma-70; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.845
AFY33307.1
Hypothetical protein; PFAM: Sigma-70, region 4; KEGG: ana:alr3583 hypothetical protein; SPTR: Alr3583 protein.
 
 
 0.826
AFY31786.1
KEGG: npu:Npun_R0605 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.775
AFY31193.1
GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: npu:Npun_F0323 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: GCN5-related N-acetyltransferase.
  
     0.771
AFY32096.1
COGs: COG1837 RNA-binding protein (contains KH domain); KEGG: npu:Npun_F2859 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
AFY35052.1
PFAM: Ycf66 protein N-terminus; InterPro IPR010004; KEGG: npu:Npun_F6308 hypothetical protein; PFAM: Uncharacterised protein family Ycf66; SPTR: Putative uncharacterized protein.
  
     0.770
AFY31712.1
PFAM: Family of unknown function (DUF490); InterPro IPR007844:IPR007452; KEGG: naz:Aazo_4575 hypothetical protein; PFAM: Protein of unknown function DUF490; AsmA; SPTR: Putative uncharacterized protein.
  
     0.767
AFY32144.1
KEGG: npu:Npun_R4809 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.766
AFY32191.1
KEGG: npu:Npun_F5007 type IV pilus assembly protein PilO; SPTR: Type IV pilus assembly protein PilO.
  
     0.766
AFY34110.1
KEGG: npu:Npun_F2819 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.765
Your Current Organism:
Calothrix sp. PCC7507
NCBI taxonomy Id: 99598
Other names: C. sp. PCC 7507, Calothrix sp. PCC 7507
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