STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM41786.1Polyketide cyclase / dehydrase and lipid transport. (174 aa)    
Predicted Functional Partners:
SDM41762.1
Trk system potassium uptake protein TrkA.
       0.630
SDM41690.1
Trk system potassium uptake protein TrkH.
       0.601
SDM41809.1
NPCBM-associated, NEW3 domain of alpha-galactosidase.
       0.540
SDM41850.1
Phosphopantothenate-cysteine ligase.
       0.502
SDM41829.1
FAD binding domain-containing protein.
       0.458
Your Current Organism:
Haloarchaeobius iranensis
NCBI taxonomy Id: 996166
Other names: H. iranensis, Haloarchaeobius iranensis Makhdoumi-Kakhki et al. 2012, Halobacteriaceae archaeon EB21, IBRC-M 10013, KCTC 4048, strain EB21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.