STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI08482.1Chromosome partitioning protein. (228 aa)    
Predicted Functional Partners:
SHI08470.1
Hypothetical protein.
       0.783
SHI07505.1
ParB/RepB/Spo0J family partition protein.
 
 
 0.699
SHI00887.1
ParB family protein; Belongs to the ParB family.
 
   0.686
SHI00943.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
 
 0.658
SHH61066.1
Chromosome segregation DNA-binding protein; Belongs to the ParB family.
 
 
 0.637
SHI05702.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
 
 0.590
SHI08454.1
Initiator Replication protein.
 
     0.569
SHI06809.1
Replication initiator protein A.
 
     0.513
SHG65967.1
Vitamin B12 transporter.
    
   0.495
SHI08494.1
Relaxase/Mobilisation nuclease domain-containing protein.
     
 0.494
Your Current Organism:
Marivita hallyeonensis
NCBI taxonomy Id: 996342
Other names: CCUG 60522, DSM 29431, KCTC 23421, M. hallyeonensis, Marivita hallyeonensis Yoon et al. 2012, Marivita sp. DPG-28, strain DPG-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.