STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH30618.15-deoxyglucuronate isomerase. (269 aa)    
Predicted Functional Partners:
SHH30905.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
 
 0.995
SHH30931.1
5-dehydro-2-deoxygluconokinase.
 
 
 0.978
SHH30675.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
    0.916
SHH30832.1
2-keto-myo-inositol dehydratase.
 
  
 0.910
SHH30701.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
    0.890
SHH31028.1
Myo-inositol 2-dehydrogenase.
 
  
 0.876
SHH30734.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
    0.873
SHH30866.1
Predicted dehydrogenase.
 
  
 0.812
SHH30651.1
Hypothetical protein.
       0.793
SHH20110.1
Predicted dehydrogenase.
 
  
 0.747
Your Current Organism:
Marivita hallyeonensis
NCBI taxonomy Id: 996342
Other names: CCUG 60522, DSM 29431, KCTC 23421, M. hallyeonensis, Marivita hallyeonensis Yoon et al. 2012, Marivita sp. DPG-28, strain DPG-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.