STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH49770.1Peptide/nickel transport system substrate-binding protein. (491 aa)    
Predicted Functional Partners:
SHH48440.1
Peptide/nickel transport system permease protein.
  0.916
SHH48465.1
Peptide/nickel transport system permease protein.
 
  0.878
SHH34743.1
Peptide/nickel transport system permease protein.
  0.707
SHH28561.1
Peptide/nickel transport system permease protein.
  0.653
SHH34778.1
Peptide/nickel transport system permease protein/glutathione transport system permease protein.
 
  0.647
SHG94028.1
Peptide/nickel transport system permease protein.
  0.644
SHH56954.1
Peptide/nickel transport system permease protein.
  0.626
SHG93995.1
Peptide/nickel transport system permease protein.
 
  0.621
SHH28592.1
Peptide/nickel transport system permease protein.
 
  0.621
SHH59919.1
Peptide/nickel transport system permease protein.
  0.620
Your Current Organism:
Marivita hallyeonensis
NCBI taxonomy Id: 996342
Other names: CCUG 60522, DSM 29431, KCTC 23421, M. hallyeonensis, Marivita hallyeonensis Yoon et al. 2012, Marivita sp. DPG-28, strain DPG-28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.