STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW01481.1ABC-type multidrug transport system, ATPase and permease component. (600 aa)    
Predicted Functional Partners:
SEW01498.1
ATP-binding cassette, subfamily B/ATP-binding cassette, subfamily B, MsbA.
 
    
0.646
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.580
SEW01549.1
Polar amino acid transport system ATP-binding protein.
     
0.515
SEV84158.1
ABC-type multidrug transport system, ATPase and permease component.
  
  
 
0.499
SEW20787.1
ATP-binding cassette, subfamily B.
  
  
 
0.496
SEW01464.1
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Belongs to the HisA/HisF family.
       0.473
SEW24270.1
ATP-binding cassette, subfamily B.
  
  
 
0.471
SEV92994.1
ATP-binding cassette, subfamily B.
  
  
 
0.468
SEW46066.1
ATP-binding cassette, subfamily B.
  
  
 
0.463
SEW42018.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.434
Your Current Organism:
Clostridium fimetarium
NCBI taxonomy Id: 99656
Other names: CIP 105360, DSM 9179, [. fimetarium, [Clostridium] fimetarium, strain Z-2189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.