STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW02262.1Putative efflux protein, MATE family. (451 aa)    
Predicted Functional Partners:
SEW43697.1
Putative efflux protein, MATE family.
  
   
 0.643
SEV82690.1
Putative efflux protein, MATE family.
  
   
 0.543
SEV90808.1
Putative efflux protein, MATE family.
  
   
 0.536
SEW02248.1
MoxR-like ATPase.
       0.536
SEW02220.1
Transglutaminase-like enzyme, putative cysteine protease.
       0.510
SEW02236.1
Protein of unknown function DUF58.
       0.510
SEW19177.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.450
SEW02034.1
PAP2 superfamily protein.
   
    0.434
SEW34300.1
PAP2 superfamily protein.
   
    0.434
Your Current Organism:
Clostridium fimetarium
NCBI taxonomy Id: 99656
Other names: CIP 105360, DSM 9179, [. fimetarium, [Clostridium] fimetarium, strain Z-2189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.