STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW14528.1Diguanylate cyclase (GGDEF) domain-containing protein. (805 aa)    
Predicted Functional Partners:
SEV93115.1
His Kinase A (phospho-acceptor) domain-containing protein.
 0.998
SEW32929.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 0.998
SEW13958.1
PAS domain S-box-containing protein.
  
 0.997
SEW14034.1
Response regulator receiver domain-containing protein.
  
 0.997
SEW19341.1
Two-component system, chemotaxis family, response regulator CheV.
  
 0.997
SEW42956.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.997
SEV85997.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.996
SEW27309.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.996
SEV82345.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.995
SEW08387.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.995
Your Current Organism:
Clostridium fimetarium
NCBI taxonomy Id: 99656
Other names: CIP 105360, DSM 9179, [. fimetarium, [Clostridium] fimetarium, strain Z-2189
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