STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW15146.1Hypothetical protein. (387 aa)    
Predicted Functional Partners:
SEW33055.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 
  0.747
SEW22231.1
Hypothetical protein.
  
     0.733
SEW15114.1
Rubrerythrin.
 
 
   0.657
SEW15129.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
       0.615
SEW26644.1
NADPH-dependent glutamate synthase beta chain.
    
  0.506
SEW28790.1
ferredoxin--NADP+ reductase.
  
  0.492
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
  0.492
SEW19426.1
Hypothetical protein.
 
 
  0.448
SEW14254.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
  0.441
Your Current Organism:
Clostridium fimetarium
NCBI taxonomy Id: 99656
Other names: CIP 105360, DSM 9179, [. fimetarium, [Clostridium] fimetarium, strain Z-2189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.