STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW16134.1TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor. (189 aa)    
Predicted Functional Partners:
SEW16116.1
MFS transporter, DHA2 family, lincomycin resistance protein; Belongs to the major facilitator superfamily.
 
     0.643
SEW04010.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.535
SEV83659.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.490
SEW01165.1
AraC-type DNA-binding protein.
  
     0.438
SEW33514.1
AraC-type DNA-binding protein.
  
     0.426
SEW34177.1
AraC-type DNA-binding protein.
 
   
 0.415
Your Current Organism:
Clostridium fimetarium
NCBI taxonomy Id: 99656
Other names: CIP 105360, DSM 9179, [. fimetarium, [Clostridium] fimetarium, strain Z-2189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.