STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW31533.1Type I restriction enzyme M protein. (472 aa)    
Predicted Functional Partners:
SEW31539.1
Type I restriction enzyme, S subunit.
 
 0.994
SEV93413.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.973
SEW31525.1
Type I restriction enzyme, R subunit.
 
 
 0.969
SEW38876.1
Type I restriction enzyme, S subunit.
 
 
 0.966
SEV83058.1
Type I restriction enzyme, S subunit.
 
 
 0.955
SEV93338.1
Type I restriction enzyme, S subunit.
 
 
 0.942
SEV83108.1
Type I restriction enzyme, R subunit.
 
 
 0.795
SEW38862.1
Type I restriction enzyme, R subunit.
 
 
 0.792
SEW31512.1
DNA adenine methylase.
       0.626
SEW19488.1
Fic/DOC family protein.
 
    0.595
Your Current Organism:
Clostridium fimetarium
NCBI taxonomy Id: 99656
Other names: CIP 105360, DSM 9179, [. fimetarium, [Clostridium] fimetarium, strain Z-2189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.