STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW35983.1AraC-type DNA-binding protein. (279 aa)    
Predicted Functional Partners:
SEW07914.1
AraC-type DNA-binding protein.
  
   0.797
SEW10623.1
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS.
  
     0.772
SEW03501.1
AraC-type DNA-binding protein.
  
     0.770
SEW33514.1
AraC-type DNA-binding protein.
  
     0.769
SEW37526.1
AraC-type DNA-binding protein.
  
     0.768
SEV83336.1
AraC-type DNA-binding protein.
  
     0.763
SEV93855.1
AraC-type DNA-binding protein.
  
     0.703
SEW33055.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.703
SEW35996.1
Nicotinamidase-related amidase.
       0.636
SEW03402.1
AraC family transcriptional regulator, arabinose operon regulatory protein.
  
     0.630
Your Current Organism:
Clostridium fimetarium
NCBI taxonomy Id: 99656
Other names: CIP 105360, DSM 9179, [. fimetarium, [Clostridium] fimetarium, strain Z-2189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.