Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV90128.1 | SEW08304.1 | SAMN05421659_10215 | SAMN05421659_104101 | Chorismate mutase / prephenate dehydratase. | N-carbamoylputrescine amidase. | 0.509 |
SEV90128.1 | SEW38544.1 | SAMN05421659_10215 | SAMN05421659_1141 | Chorismate mutase / prephenate dehydratase. | Carboxynorspermidine decarboxylase. | 0.558 |
SEV90128.1 | guaA | SAMN05421659_10215 | SAMN05421659_101162 | Chorismate mutase / prephenate dehydratase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.699 |
SEV90128.1 | hisI | SAMN05421659_10215 | SAMN05421659_1164 | Chorismate mutase / prephenate dehydratase. | phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase; In the C-terminal section; belongs to the PRA-PH family. | 0.682 |
SEW08304.1 | SEV90128.1 | SAMN05421659_104101 | SAMN05421659_10215 | N-carbamoylputrescine amidase. | Chorismate mutase / prephenate dehydratase. | 0.509 |
SEW08304.1 | SEW36342.1 | SAMN05421659_104101 | SAMN05421659_11282 | N-carbamoylputrescine amidase. | Spermidine synthase. | 0.439 |
SEW08304.1 | SEW38544.1 | SAMN05421659_104101 | SAMN05421659_1141 | N-carbamoylputrescine amidase. | Carboxynorspermidine decarboxylase. | 0.522 |
SEW08304.1 | aguA | SAMN05421659_104101 | SAMN05421659_104102 | N-carbamoylputrescine amidase. | Agmatine deiminase. | 0.999 |
SEW08304.1 | guaA | SAMN05421659_104101 | SAMN05421659_101162 | N-carbamoylputrescine amidase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.465 |
SEW08304.1 | speE | SAMN05421659_104101 | SAMN05421659_1143 | N-carbamoylputrescine amidase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. | 0.892 |
SEW18101.1 | SEW38544.1 | SAMN05421659_10611 | SAMN05421659_1141 | NAD(P)H dehydrogenase (quinone). | Carboxynorspermidine decarboxylase. | 0.730 |
SEW36342.1 | SEW08304.1 | SAMN05421659_11282 | SAMN05421659_104101 | Spermidine synthase. | N-carbamoylputrescine amidase. | 0.439 |
SEW36342.1 | SEW38544.1 | SAMN05421659_11282 | SAMN05421659_1141 | Spermidine synthase. | Carboxynorspermidine decarboxylase. | 0.549 |
SEW36342.1 | SEW38550.1 | SAMN05421659_11282 | SAMN05421659_1142 | Spermidine synthase. | Saccharopine dehydrogenase (NAD+, L-lysine forming). | 0.414 |
SEW36342.1 | aguA | SAMN05421659_11282 | SAMN05421659_104102 | Spermidine synthase. | Agmatine deiminase. | 0.409 |
SEW36342.1 | guaA | SAMN05421659_11282 | SAMN05421659_101162 | Spermidine synthase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.435 |
SEW38544.1 | SEV90128.1 | SAMN05421659_1141 | SAMN05421659_10215 | Carboxynorspermidine decarboxylase. | Chorismate mutase / prephenate dehydratase. | 0.558 |
SEW38544.1 | SEW08304.1 | SAMN05421659_1141 | SAMN05421659_104101 | Carboxynorspermidine decarboxylase. | N-carbamoylputrescine amidase. | 0.522 |
SEW38544.1 | SEW18101.1 | SAMN05421659_1141 | SAMN05421659_10611 | Carboxynorspermidine decarboxylase. | NAD(P)H dehydrogenase (quinone). | 0.730 |
SEW38544.1 | SEW36342.1 | SAMN05421659_1141 | SAMN05421659_11282 | Carboxynorspermidine decarboxylase. | Spermidine synthase. | 0.549 |
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