STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW42538.1ABC-2 type transport system ATP-binding protein. (250 aa)    
Predicted Functional Partners:
SEW42532.1
ABC-type multidrug transport system, permease component.
 
 
  0.889
SEW42525.1
ABC-2 type transporter.
  
 
  0.829
SEW19604.1
ABC-2 type transport system permease protein.
 
 
 0.714
SEW19615.1
ABC-2 type transport system permease protein.
 
 
  0.687
SEW00211.1
ABC-2 family transporter protein.
  
 0.682
SEV85964.1
ABC-2 type transport system permease protein.
 
 
 0.637
SEW41521.1
ABC-2 family transporter protein.
 
  0.615
SEW42543.1
Transcriptional regulator PadR-like family protein.
 
    0.595
SEW14604.1
ABC-2 type transport system permease protein.
  
 
  0.585
SEW34679.1
ABC-2 type transport system permease protein.
  
  0.571
Your Current Organism:
Clostridium fimetarium
NCBI taxonomy Id: 99656
Other names: CIP 105360, DSM 9179, [. fimetarium, [Clostridium] fimetarium, strain Z-2189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.