STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW43641.1Predicted DNA-binding protein, UPF0251 family. (249 aa)    
Predicted Functional Partners:
SEW33055.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.544
SEW44732.1
MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain.
 
   
 0.481
SEW44726.1
MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain.
 
   
 0.480
SEW43648.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
       0.478
SEW43635.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.473
SEW44691.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
  
 0.471
SEW44707.1
Predicted DNA-binding protein, UPF0251 family; Belongs to the UPF0251 family.
 
   
0.465
SEW44745.1
C_GCAxxG_C_C family probable redox protein.
 
    0.461
SEW44738.1
Predicted Fe-Mo cluster-binding protein, NifX family.
 
    0.437
SEW44316.1
7, 8-dihydropterin-6-yl-methyl-4-(beta-D- ribofuranosyl)aminobenzene 5'-phosphate synthase.
 
     0.434
Your Current Organism:
Clostridium fimetarium
NCBI taxonomy Id: 99656
Other names: CIP 105360, DSM 9179, [. fimetarium, [Clostridium] fimetarium, strain Z-2189
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.