STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGM_0036Putative thioesterase. (258 aa)    
Predicted Functional Partners:
SGM_0039
CDA peptide synthetase II.
 
 
 0.998
SGM_0033
Putative NRPS.
 
 
 0.994
SGM_4578
Similar to conserved protein of unknown function; Belongs to the P-Pant transferase superfamily.
  
 
 0.992
SGM_2572
Putative NRPS.
 
 
 0.984
SGM_3320
Non-ribosomal peptide synthetase.
 
 
 0.984
SGM_0034
Putative NRPS.
 
 
 0.979
SGM_6620
Non-ribosomal peptide synthase; Overlaps another CDS with the same product name.
 
 
 0.979
SGM_4587
Polyketide synthase.
 
 
 0.976
SGM_2882
Putative NRPS.
 
 
 0.975
SGM_6621
Non-ribosomal peptide synthase; Overlaps another CDS with the same product name.
 
 
 0.975
Your Current Organism:
Streptomyces griseoaurantiacus
NCBI taxonomy Id: 996637
Other names: S. griseoaurantiacus M045, Streptomyces griseoaurantiacus M045, Streptomyces griseoaurantiacus str. M045, Streptomyces griseoaurantiacus strain M045
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.