STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGM_1911Similar to conserved protein of unknown function. (102 aa)    
Predicted Functional Partners:
SGM_1912
Putative MutT/nudix-family hydrolase; Belongs to the Nudix hydrolase family.
 
     0.822
SGM_1913
Signal peptidase; Belongs to the peptidase S26 family.
       0.796
whiB-2
Transcriptional regulatory protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.771
whiB-6
WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.771
whiB
Transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.768
whiB-7
Sporulation regulatory protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.767
SGM_6236
Similar to conserved protein of unknown function.
  
     0.749
SGM_1914
Signal peptidase I; Belongs to the peptidase S26 family.
       0.728
SGM_1915
Signal peptidase; Belongs to the peptidase S26 family.
       0.728
SGM_1916
Signal peptidase I; Belongs to the peptidase S26 family.
       0.728
Your Current Organism:
Streptomyces griseoaurantiacus
NCBI taxonomy Id: 996637
Other names: S. griseoaurantiacus M045, Streptomyces griseoaurantiacus M045, Streptomyces griseoaurantiacus str. M045, Streptomyces griseoaurantiacus strain M045
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