STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ47933.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)    
Predicted Functional Partners:
APZ47932.1
Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.817
APZ47931.1
NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.529
APZ47930.1
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.522
APZ47934.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.480
APZ47731.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.471
APZ47357.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.412
APZ45773.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.408
Your Current Organism:
Polaribacter reichenbachii
NCBI taxonomy Id: 996801
Other names: KCTC 23969, KMM 6386, LMG 26443, LMG:26443, P. reichenbachii, Polaribacter reichenbachii Nedashkovskaya et al. 2013, Polaribacter sp. KMM 6386, strain 6Alg 8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.