STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGY76564.1ABC superfamily ATP binding cassette transporter, ABC/membrane protein; COG: COG1132. (345 aa)    
Predicted Functional Partners:
EGY76565.1
Hypothetical protein.
     0.989
EGY76567.1
Hypothetical protein.
     0.967
glnQ
Glutamine ABC superfamily ATP binding cassette transporter, ABC protein; COG: COG1126.
 
     
0.866
EGY76563.1
Hypothetical protein.
 
     0.853
EGY76562.1
Hypothetical protein.
 
  
  0.837
EGY76560.1
ABC superfamily ATP binding cassette transporter ABC protein; COG: COG1122.
  
 
0.811
EGY76561.1
Hypothetical protein.
    
  0.781
EGY76566.1
ABC superfamily ATP binding cassette transporter, ABC/membrane protein; COG: COG1132.
 
    
0.755
cbiO2
Cobalt ABC superfamily ATP binding cassette transporter, ABC protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 
0.656
EGY76568.1
AraC family transcriptional regulator.
 
    0.637
Your Current Organism:
Peptoniphilus indolicus
NCBI taxonomy Id: 997350
Other names: P. indolicus ATCC 29427, Peptoniphilus indolicus ATCC 29427, Peptoniphilus indolicus CCUG 17639, Peptoniphilus indolicus CCUG 46591, Peptoniphilus indolicus GIFU 7848, Peptoniphilus indolicus NCTC 11088, Peptoniphilus indolicus str. ATCC 29427, Peptoniphilus indolicus strain ATCC 29427
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