STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGQ17900.1Response regulator; COG: COG3279. (244 aa)    
Predicted Functional Partners:
EGQ17899.1
Hypothetical protein; COG: COG3275.
 
 0.979
EGQ14554.1
Sensor histidine kinase; COG: COG3275.
 
 0.906
EGQ12332.1
Two component system sensor histidine kinase/response regulator, hybrid; COG: COG0642.
 
  
 0.760
EGQ12276.1
Transcriptional regulator.
    
 0.685
EGQ11782.1
Transcriptional regulator.
    
 0.685
EGQ17437.1
DNA-binding response regulator/sensor histidine kinase; COG: COG0642.
     
 0.607
EGQ17901.1
Hypothetical protein.
       0.479
Your Current Organism:
Prevotella nigrescens
NCBI taxonomy Id: 997352
Other names: P. nigrescens ATCC 33563, Prevotella nigrescens ATCC 33563, Prevotella nigrescens JCM 12250, Prevotella nigrescens NCTC 9336, Prevotella nigrescens str. ATCC 33563, Prevotella nigrescens strain ATCC 33563
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.