STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIFATRAF interacting protein with forkhead associated domain. (185 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor associated factor 6.
    
 0.986
ALPK1
Alpha kinase 1.
   
 
 0.855
ENSOPRP00000011346
annotation not available
    
 0.824
TRAF1
TNF receptor associated factor 1.
    
 0.766
ENSOPRP00000008293
annotation not available
    
 0.753
TRAF4
TNF receptor associated factor 4.
    
 0.753
TRAF3
TNF receptor associated factor 3.
    
 0.693
PDZRN3
PDZ domain containing ring finger 3.
    
 0.688
RNF41
Ring finger protein 41.
    
 0.688
PDZRN4
PDZ domain containing ring finger 4.
    
 0.688
Your Current Organism:
Ochotona princeps
NCBI taxonomy Id: 9978
Other names: American pika, O. princeps, southern American pika
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.